Error for configuring dealii v9.5.2 on frontera (using candi)

ASPECT
1

Hi! I’m now installing aspect-v2.6.0-pre on TACC frontera. I followed an instruction online: Installation on Frontera · geodynamics/aspect Wiki (github.com)
But I got errors when I do the candi part:

./candi.sh -j 28 --packages="once:p4est once:hdf5 once:sundials once:trilinos dealii" -p $WORK2/libs

Some of the errors are shown as below:

2.3.2/DEBUG/lib/libp4est.so /work2/10103/hx38324/frontera/libs/p4est-2.3.2/DEBUG/lib/libsc.so
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::randomize()'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::packAndPrepare(Tpetra::SrcDistObject const&, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<float*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>&, Kokkos::DualView<unsigned long*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, unsigned long&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::subViewNonConst(Teuchos::Range1D const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::update(float const&, Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&, float const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::reallocArraysForNumPacketsPerLid(unsigned long, unsigned long)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::need_sync_device() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::unpackAndCombine(Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<float*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, Kokkos::DualView<unsigned long*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, unsigned long, Tpetra::CombineMode, Kokkos::Serial const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `virtual thunk to Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::description[abi:cxx11]() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosamesos2.so.14.4: undefined reference to `Amesos2::Lapack<Tpetra::CrsMatrix<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >, Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > >::Lapack(Teuchos::RCP<Tpetra::CrsMatrix<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const>, Teuchos::RCP<Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > >, Teuchos::RCP<Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const>)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::getLocalViewHost(Tpetra::Access::ReadWriteStruct)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::Vector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::norm2() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::getVectorNonConst(unsigned long)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::unpackAndCombine(Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<float*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, Kokkos::DualView<unsigned long*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, unsigned long, Tpetra::CombineMode, Kokkos::Serial const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::reallocImportsIfNeeded(unsigned long, bool, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const*, bool, Tpetra::CombineMode)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::getGlobalLength() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::unpackAndCombine(Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<float*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, Kokkos::DualView<unsigned long*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, unsigned long, Tpetra::CombineMode)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::MultiVector(Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&, Teuchos::DataAccess)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `virtual thunk to Tpetra::Vector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::describe(Teuchos::basic_FancyOStream<char, std::char_traits<char> >&, Teuchos::EVerbosityLevel) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::subView(Teuchos::ArrayView<unsigned long const> const&) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::copyAndPermute(Tpetra::SrcDistObject const&, unsigned long, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Tpetra::CombineMode)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::describe(Teuchos::basic_FancyOStream<char, std::char_traits<char> >&, Teuchos::EVerbosityLevel) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `void Tpetra::deep_copy<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >(Teuchos::SerialDenseMatrix<int, float>&, Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::update(float const&, Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&, float const&, Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&, float const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::packAndPrepare(Tpetra::SrcDistObject const&, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<float*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>&, Kokkos::DualView<unsigned long*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, unsigned long&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::description[abi:cxx11]() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `virtual thunk to Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::description[abi:cxx11]() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::Vector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::dot(Tpetra::Vector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::putScalar(float const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::unpackAndCombine(Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<float*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, Kokkos::DualView<unsigned long*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, unsigned long, Tpetra::CombineMode)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::Vector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::describe(Teuchos::basic_FancyOStream<char, std::char_traits<char> >&, Teuchos::EVerbosityLevel) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::norm2(Teuchos::ArrayView<float> const&) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::subView(Teuchos::Range1D const&) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::packAndPrepare(Tpetra::SrcDistObject const&, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<float*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>&, Kokkos::DualView<unsigned long*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, unsigned long&, Kokkos::Serial const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::multiply(Teuchos::ETransp, Teuchos::ETransp, float const&, Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&, Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&, float const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::getVector(unsigned long) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::constantNumberOfPackets() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::norm1(Teuchos::ArrayView<float> const&) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::Vector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::description[abi:cxx11]() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `virtual thunk to Tpetra::Vector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::description[abi:cxx11]() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::copyAndPermute(Tpetra::SrcDistObject const&, unsigned long, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Tpetra::CombineMode)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::getLocalViewDevice(Tpetra::Access::ReadWriteStruct)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::getLocalLength() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::packAndPrepare(Tpetra::SrcDistObject const&, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<float*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>&, Kokkos::DualView<unsigned long*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void>, unsigned long&, Kokkos::Serial const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `void Tpetra::deep_copy<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >(Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >&, Teuchos::SerialDenseMatrix<int, float> const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::describe(Teuchos::basic_FancyOStream<char, std::char_traits<char> >&, Teuchos::EVerbosityLevel) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosamesos2.so.14.4: undefined reference to `Amesos2::TachoSolver<Tpetra::CrsMatrix<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >, Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > >::TachoSolver(Teuchos::RCP<Tpetra::CrsMatrix<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const>, Teuchos::RCP<Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > >, Teuchos::RCP<Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const>)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::normInf(Teuchos::ArrayView<float> const&) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::MultiVector(Teuchos::RCP<Tpetra::Map<int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const> const&, unsigned long, bool)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::assign(Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::copyAndPermute(Tpetra::SrcDistObject const&, unsigned long, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Tpetra::CombineMode, Kokkos::Serial const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::constantNumberOfPackets() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosamesos2.so.14.4: undefined reference to `Amesos2::KLU2<Tpetra::CrsMatrix<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >, Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > >::KLU2(Teuchos::RCP<Tpetra::CrsMatrix<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const>, Teuchos::RCP<Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > >, Teuchos::RCP<Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const>)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::description[abi:cxx11]() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::getLocalViewDevice(Tpetra::Access::ReadOnlyStruct) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::subViewNonConst(Teuchos::ArrayView<unsigned long const> const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::scale(float const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::copyAndPermute(Tpetra::SrcDistObject const&, unsigned long, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Kokkos::DualView<int const*, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void, void> const&, Tpetra::CombineMode, Kokkos::Serial const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `virtual thunk to Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::describe(Teuchos::basic_FancyOStream<char, std::char_traits<char> >&, Teuchos::EVerbosityLevel) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::Vector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::Vector(Teuchos::RCP<Tpetra::Map<int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const> const&, bool)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::reallocImportsIfNeeded(unsigned long, bool, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const*, bool, Tpetra::CombineMode)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::doTransfer(Tpetra::SrcDistObject const&, Tpetra::Details::Transfer<int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&, char const*, Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::ReverseOption, Tpetra::CombineMode, bool)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::removeEmptyProcessesInPlace(Teuchos::RCP<Tpetra::Map<int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const> const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::isConstantStride() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::dot(Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const&, Teuchos::ArrayView<float> const&) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::removeEmptyProcessesInPlace(Teuchos::RCP<Tpetra::Map<int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const> const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::getNumVectors() const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `virtual thunk to Tpetra::DistObject<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::describe(Teuchos::basic_FancyOStream<char, std::char_traits<char> >&, Teuchos::EVerbosityLevel) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::MultiVector(Teuchos::RCP<Tpetra::Map<int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> > const> const&, Kokkos::DualView<float**, Kokkos::LayoutLeft, Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>, void> const&)'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::get1dCopy(Teuchos::ArrayView<float> const&, unsigned long) const'
ld.bfd: /work2/10103/hx38324/frontera/libs/trilinos-release-14-4-0/lib/libstratimikosbelos.so.14.4: undefined reference to `Tpetra::MultiVector<float, int, long long, Tpetra::KokkosCompat::KokkosDeviceWrapperNode<Kokkos::Serial, Kokkos::HostSpace> >::checkSizes(Tpetra::SrcDistObject const&)'
gmake[2]: *** [CheckCompilerSetupExec] Error 1
gmake[2]: Leaving directory `/work2/10103/hx38324/frontera/libs/tmp/build/deal.II-v9.5.2/check_compiler_setup/DEAL_II_HAVE_USABLE_FLAGS_DEBUG'
gmake[1]: *** [CMakeFiles/CheckCompilerSetupExec.dir/all] Error 2
gmake[1]: Leaving directory `/work2/10103/hx38324/frontera/libs/tmp/build/deal.II-v9.5.2/check_compiler_setup/DEAL_II_HAVE_USABLE_FLAGS_DEBUG'
gmake: *** [all] Error 2


CMake Error at cmake/setup_finalize.cmake:126 (message):


    Configuration error: Cannot compile a test program with the final set of
    compiler and linker flags:
      CXX flags (DEBUG): -qopenmp-simd -march=native -O0 -g -gdwarf-2 -grecord-gcc-switches
      LD flags  (DEBUG): -qopenmp -rdynamic -fuse-ld=bfd
      LIBRARIES (DEBUG): dl;rt;




Call Stack (most recent call first):
  cmake/macros/macro_verbose_include.cmake:19 (include)
  CMakeLists.txt:123 (verbose_include)


-- Configuring incomplete, errors occurred!
Failure with exit status: 1
Exit message: There was a problem configuring dealii v9.5.2.

Does anyone know how to fix this? I’d highly appreciate it!

candi_configure.log (107.4 KB)

2

Solved. It seems that this is caused by the newest version of candi (at least on TACC frontera). I tried an older version (candi.v9.5.1) and successfully built it.