This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by p4est configure 2.3.2, which was generated by GNU Autoconf 2.69. Invocation command line was $ /home/wangyj/software/INSTALL/candi/tmp/unpack/p4est-2.3.2/configure --enable-mpi --enable-shared --disable-vtk-binary --without-blas --prefix=/home/wangyj/software/INSTALL/candi/p4est-2.3.2/FAST CFLAGS=-O2 CPPFLAGS=-DSC_LOG_PRIORITY=SC_LP_ESSENTIAL F77=mpif77 ## --------- ## ## Platform. ## ## --------- ## hostname = master uname -m = x86_64 uname -r = 3.10.0-1160.76.1.el7.x86_64 uname -s = Linux uname -v = #1 SMP Wed Aug 10 16:21:17 UTC 2022 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/wangyj/software/INSTALL/candi/cmake-3.20.5-linux-x86_64/bin PATH: //home/software/openmpi/3.1.4/bin PATH: /home/software/GMT/6.4.0/bin PATH: /home/wangyj/.conda/envs/wangpy/bin PATH: /home/software/miniconda3/4.12.0/condabin PATH: /usr/lib64/qt-3.3/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /home/wangyj/software/ParaView-5.11.0-MPI-Linux-Python3.9-x86_64/bin PATH: /home/wangyj/.local/bin PATH: /home/wangyj/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:3024: checking for a BSD-compatible install configure:3092: result: /usr/bin/install -c configure:3103: checking whether build environment is sane configure:3158: result: yes configure:3309: checking for a thread-safe mkdir -p configure:3348: result: /usr/bin/mkdir -p configure:3355: checking for gawk configure:3371: found /usr/bin/gawk configure:3382: result: gawk configure:3393: checking whether make sets $(MAKE) configure:3415: result: yes configure:3444: checking whether make supports nested variables configure:3461: result: yes configure:3598: checking whether make supports nested variables configure:3615: result: yes configure:3642: checking for a sed that does not truncate output configure:3706: result: /usr/bin/sed configure:3725: checking Major version configure:3727: result: 2 configure:3729: checking Minor version configure:3731: result: 3 configure:3733: checking Point version configure:3735: result: 2 configure:3968: checking whether we are using MPI configure:3970: result: yes configure:3987: checking whether we are using MPI I/O configure:3989: result: yes configure:4006: checking whether we are using MPI_Init_thread configure:4008: result: yes configure:4018: checking for mpiexec configure:4034: found //home/software/openmpi/3.1.4/bin/mpiexec configure:4045: result: mpiexec configure:4085: F77 set to mpif77 configure:4092: FC set to mpif90 configure:4098: CC set to /home/software/openmpi/3.1.4/bin/mpicc configure:4104: CXX set to mpicxx configure:4357: checking for Fortran 77 compiler version configure:4366: mpif77 --version >&5 GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44) Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:4377: $? = 0 configure:4366: mpif77 -v >&5 Using built-in specs. COLLECT_GCC=/usr/bin/gfortran COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) configure:4377: $? = 0 configure:4366: mpif77 -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:4377: $? = 4 configure:4366: mpif77 -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:4377: $? = 4 configure:4392: checking whether the Fortran 77 compiler works configure:4414: mpif77 conftest.f >&5 configure:4418: $? = 0 configure:4466: result: yes configure:4469: checking for Fortran 77 compiler default output file name configure:4471: result: a.out configure:4477: checking for suffix of executables configure:4484: mpif77 -o conftest conftest.f >&5 configure:4488: $? = 0 configure:4510: result: configure:4526: checking whether we are cross compiling configure:4534: mpif77 -o conftest conftest.f >&5 configure:4538: $? = 0 configure:4545: ./conftest configure:4549: $? = 0 configure:4564: result: no configure:4569: checking for suffix of object files configure:4585: mpif77 -c conftest.f >&5 configure:4589: $? = 0 configure:4610: result: o configure:4618: checking whether we are using the GNU Fortran 77 compiler configure:4631: mpif77 -c conftest.F >&5 configure:4631: $? = 0 configure:4640: result: yes configure:4646: checking whether mpif77 accepts -g configure:4657: mpif77 -c -g conftest.f >&5 configure:4657: $? = 0 configure:4665: result: yes configure:4698: checking build system type configure:4712: result: x86_64-pc-linux-gnu configure:4732: checking host system type configure:4745: result: x86_64-pc-linux-gnu configure:4770: checking how to get verbose linking output from mpif77 configure:4780: mpif77 -c -g -O2 conftest.f >&5 configure:4780: $? = 0 configure:4798: mpif77 -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/f951 conftest.f -ffixed-form -I /home/software/openmpi/3.1.4/include -I /home/software/openmpi/3.1.4/lib -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-redhat-linux/4.8.5/finclude -o /tmp/ccPuvAQf.s GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v -I /home/software/openmpi/3.1.4/include -I /home/software/openmpi/3.1.4/lib --64 -o /tmp/cc3ubyPT.o /tmp/ccPuvAQf.s GNU assembler version 2.27 (x86_64-redhat-linux) using BFD version version 2.27-44.base.el7_9.1 Reading specs from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libgfortran.spec rename spec lib to liborig /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. /tmp/cc3ubyPT.o -rpath /home/software/openmpi/3.1.4/lib --enable-new-dtags -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lpthread -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o configure:4881: result: -v configure:4883: checking for Fortran 77 libraries of mpif77 configure:4906: mpif77 -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/f951 conftest.f -ffixed-form -I /home/software/openmpi/3.1.4/include -I /home/software/openmpi/3.1.4/lib -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-redhat-linux/4.8.5/finclude -o /tmp/ccJXzIKm.s GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v -I /home/software/openmpi/3.1.4/include -I /home/software/openmpi/3.1.4/lib --64 -o /tmp/ccLbGz10.o /tmp/ccJXzIKm.s GNU assembler version 2.27 (x86_64-redhat-linux) using BFD version version 2.27-44.base.el7_9.1 Reading specs from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libgfortran.spec rename spec lib to liborig /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. /tmp/ccLbGz10.o -rpath /home/software/openmpi/3.1.4/lib --enable-new-dtags -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lpthread -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o configure:5102: result: -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread configure:5117: checking whether make supports the include directive configure:5132: make -f confmf.GNU && cat confinc.out this is the am__doit target configure:5135: $? = 0 configure:5154: result: yes (GNU style) configure:5224: checking for gcc configure:5251: result: /home/software/openmpi/3.1.4/bin/mpicc configure:5480: checking for C compiler version configure:5489: /home/software/openmpi/3.1.4/bin/mpicc --version >&5 gcc (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44) Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5500: $? = 0 configure:5489: /home/software/openmpi/3.1.4/bin/mpicc -v >&5 Using built-in specs. COLLECT_GCC=/usr/bin/gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) configure:5500: $? = 0 configure:5489: /home/software/openmpi/3.1.4/bin/mpicc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:5500: $? = 4 configure:5489: /home/software/openmpi/3.1.4/bin/mpicc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:5500: $? = 4 configure:5504: checking whether we are using the GNU C compiler configure:5531: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:5531: $? = 0 configure:5540: result: yes configure:5549: checking whether /home/software/openmpi/3.1.4/bin/mpicc accepts -g configure:5577: /home/software/openmpi/3.1.4/bin/mpicc -c -g -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:5577: $? = 0 configure:5634: result: yes configure:5651: checking for /home/software/openmpi/3.1.4/bin/mpicc option to accept ISO C89 configure:5722: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:5722: $? = 0 configure:5735: result: none needed configure:5760: checking whether /home/software/openmpi/3.1.4/bin/mpicc understands -c and -o together configure:5790: /home/software/openmpi/3.1.4/bin/mpicc -c conftest.c -o conftest2.o configure:5793: $? = 0 configure:5790: /home/software/openmpi/3.1.4/bin/mpicc -c conftest.c -o conftest2.o configure:5793: $? = 0 configure:5805: result: yes configure:5824: checking dependency style of /home/software/openmpi/3.1.4/bin/mpicc configure:5935: result: gcc3 configure:5956: checking for dummy main to link with Fortran 77 libraries configure:5990: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread >&5 configure:5990: $? = 0 configure:6035: result: none configure:6068: checking for Fortran 77 name-mangling scheme configure:6081: mpif77 -c -g -O2 conftest.f >&5 configure:6081: $? = 0 configure:6122: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c cfortran_test.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread >&5 /tmp/cc03AxfI.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `foobar' collect2: error: ld returned 1 exit status configure:6122: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:6122: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c cfortran_test.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread >&5 configure:6122: $? = 0 configure:6180: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c cfortran_test.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread >&5 configure:6180: $? = 0 configure:6222: result: lower case, underscore, no extra underscore configure:6337: checking for Fortran compiler version configure:6346: mpif90 --version >&5 GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44) Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:6357: $? = 0 configure:6346: mpif90 -v >&5 Using built-in specs. COLLECT_GCC=/usr/bin/gfortran COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) configure:6357: $? = 0 configure:6346: mpif90 -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:6357: $? = 4 configure:6346: mpif90 -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:6357: $? = 4 configure:6366: checking whether we are using the GNU Fortran compiler configure:6379: mpif90 -c conftest.F >&5 configure:6379: $? = 0 configure:6388: result: yes configure:6394: checking whether mpif90 accepts -g configure:6405: mpif90 -c -g conftest.f >&5 configure:6405: $? = 0 configure:6413: result: yes configure:6447: checking how to get verbose linking output from mpif90 configure:6457: mpif90 -c -g -O2 conftest.f >&5 configure:6457: $? = 0 configure:6475: mpif90 -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/f951 conftest.f -ffixed-form -I /home/software/openmpi/3.1.4/include -I /home/software/openmpi/3.1.4/lib -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-redhat-linux/4.8.5/finclude -o /tmp/ccFGSsyI.s GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v -I /home/software/openmpi/3.1.4/include -I /home/software/openmpi/3.1.4/lib --64 -o /tmp/ccuXsM6p.o /tmp/ccFGSsyI.s GNU assembler version 2.27 (x86_64-redhat-linux) using BFD version version 2.27-44.base.el7_9.1 Reading specs from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libgfortran.spec rename spec lib to liborig /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. /tmp/ccuXsM6p.o -rpath /home/software/openmpi/3.1.4/lib --enable-new-dtags -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lpthread -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o configure:6558: result: -v configure:6560: checking for Fortran libraries of mpif90 configure:6583: mpif90 -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/f951 conftest.f -ffixed-form -I /home/software/openmpi/3.1.4/include -I /home/software/openmpi/3.1.4/lib -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-redhat-linux/4.8.5/finclude -o /tmp/ccTSoAHP.s GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v -I /home/software/openmpi/3.1.4/include -I /home/software/openmpi/3.1.4/lib --64 -o /tmp/ccETRyyx.o /tmp/ccTSoAHP.s GNU assembler version 2.27 (x86_64-redhat-linux) using BFD version version 2.27-44.base.el7_9.1 Reading specs from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libgfortran.spec rename spec lib to liborig /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. /tmp/ccETRyyx.o -rpath /home/software/openmpi/3.1.4/lib --enable-new-dtags -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lpthread -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o configure:6779: result: -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread configure:6795: checking for dummy main to link with Fortran libraries configure:6837: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread >&5 configure:6837: $? = 0 configure:6890: result: none configure:6923: checking for Fortran name-mangling scheme configure:6936: mpif90 -c -g -O2 conftest.f >&5 configure:6936: $? = 0 configure:6985: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c cfortran_test.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread >&5 /tmp/cczL30bJ.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `foobar' collect2: error: ld returned 1 exit status configure:6985: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:6985: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c cfortran_test.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread >&5 configure:6985: $? = 0 configure:7051: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c cfortran_test.o -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread >&5 configure:7051: $? = 0 configure:7093: result: lower case, underscore, no extra underscore configure:7215: checking for C++ compiler version configure:7224: mpicxx --version >&5 g++ (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44) Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:7235: $? = 0 configure:7224: mpicxx -v >&5 Using built-in specs. COLLECT_GCC=/usr/bin/g++ COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) configure:7235: $? = 0 configure:7224: mpicxx -V >&5 g++: error: unrecognized command line option '-V' g++: fatal error: no input files compilation terminated. configure:7235: $? = 4 configure:7224: mpicxx -qversion >&5 g++: error: unrecognized command line option '-qversion' g++: fatal error: no input files compilation terminated. configure:7235: $? = 4 configure:7239: checking whether we are using the GNU C++ compiler configure:7274: mpicxx -c -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.cpp >&5 configure:7274: $? = 0 configure:7283: result: yes configure:7292: checking whether mpicxx accepts -g configure:7328: mpicxx -c -g -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.cpp >&5 configure:7328: $? = 0 configure:7401: result: yes configure:7426: checking dependency style of mpicxx configure:7537: result: gcc3 configure:7560: checking whether mpif77 understands -c and -o together configure:7578: mpif77 -g -O2 -c conftest.f -o conftest2.o >&5 configure:7582: $? = 0 configure:7589: mpif77 -g -O2 -c conftest.f -o conftest2.o >&5 configure:7593: $? = 0 configure:7601: result: yes configure:7680: checking whether mpif90 understands -c and -o together configure:7698: mpif90 -g -O2 -c conftest.f -o conftest2.o >&5 configure:7702: $? = 0 configure:7709: mpif90 -g -O2 -c conftest.f -o conftest2.o >&5 configure:7713: $? = 0 configure:7721: result: yes configure:7796: checking whether /home/software/openmpi/3.1.4/bin/mpicc and cc understand -c and -o together configure:7843: /home/software/openmpi/3.1.4/bin/mpicc -c conftest.c -o conftest2.o >&5 configure:7847: $? = 0 configure:7853: /home/software/openmpi/3.1.4/bin/mpicc -c conftest.c -o conftest2.o >&5 configure:7857: $? = 0 configure:7868: cc -c conftest.c >&5 configure:7872: $? = 0 configure:7880: cc -c conftest.c -o conftest2.o >&5 configure:7884: $? = 0 configure:7890: cc -c conftest.c -o conftest2.o >&5 configure:7894: $? = 0 configure:7912: result: yes configure:7930: checking whether mpicxx understands -c and -o together configure:7970: mpicxx -g -O2 -c conftest.cpp -o conftest2.o >&5 configure:7974: $? = 0 configure:7981: mpicxx -g -O2 -c conftest.cpp -o conftest2.o >&5 configure:7985: $? = 0 configure:7993: result: yes configure:8010: checking compile/link for MPI C program configure:8045: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:8045: $? = 0 configure:8046: result: successful configure:8065: checking compile/link for MPI CXX program configure:8102: mpicxx -o conftest -g -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.cpp >&5 configure:8102: $? = 0 configure:8103: result: successful configure:8123: checking compile/link for MPI I/O C program configure:8163: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:8163: $? = 0 configure:8164: result: successful configure:8178: checking compile/link for MPI_Init_thread C program configure:8214: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:8214: $? = 0 configure:8215: result: successful configure:8229: checking compile/link for MPI_Win_allocate_shared C program configure:8273: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:8273: $? = 0 configure:8274: result: successful configure:8292: checking compile/link for MPI_COMM_TYPE_SHARED C program configure:8329: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:8329: $? = 0 configure:8330: result: successful configure:8352: Trying to determine MPI_INCLUDES configure:8356: checking -showme:compile configure:8359: result: Successful configure:8372: Found MPI_INCLUDES -I/home/software/openmpi/3.1.4/include configure:8378: Found MPI_INCLUDE_PATH /home/software/openmpi/3.1.4/include configure:8436: checking for ar configure:8452: found /usr/bin/ar configure:8463: result: ar configure:8489: checking the archiver (ar) interface configure:8505: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:8505: $? = 0 configure:8507: ar cru libconftest.a conftest.o >&5 configure:8510: $? = 0 configure:8538: result: ar configure:8575: checking for splint configure:8606: result: no configure:8615: WARNING: Static source code checker splint not found configure:8670: checking whether the C compiler accepts the -V flag configure:8715: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -V -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 gcc: error: unrecognized command line option '-V' configure:8715: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | /* end confdefs.h. */ | | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | ; | return 0; | } | configure:8738: result: no configure:8791: checking whether the C compiler accepts the -dumpversion flag configure:8836: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -dumpversion -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 4.8.5 configure:8836: $? = 0 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | /* end confdefs.h. */ | | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | ; | return 0; | } | configure:8859: result: no configure:8951: checking how to print strings configure:8978: result: printf configure:8999: checking for a sed that does not truncate output configure:9063: result: /usr/bin/sed configure:9081: checking for grep that handles long lines and -e configure:9139: result: /usr/bin/grep configure:9144: checking for egrep configure:9206: result: /usr/bin/grep -E configure:9211: checking for fgrep configure:9273: result: /usr/bin/grep -F configure:9308: checking for ld used by /home/software/openmpi/3.1.4/bin/mpicc configure:9375: result: /usr/bin/ld configure:9382: checking if the linker (/usr/bin/ld) is GNU ld configure:9397: result: yes configure:9409: checking for BSD- or MS-compatible name lister (nm) configure:9463: result: /usr/bin/nm -B configure:9593: checking the name lister (/usr/bin/nm -B) interface configure:9600: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:9603: /usr/bin/nm -B "conftest.o" configure:9606: output 0000000000000000 B some_variable configure:9613: result: BSD nm configure:9616: checking whether ln -s works configure:9620: result: yes configure:9628: checking the maximum length of command line arguments configure:9759: result: 1572864 configure:9807: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:9847: result: func_convert_file_noop configure:9854: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:9874: result: func_convert_file_noop configure:9881: checking for /usr/bin/ld option to reload object files configure:9888: result: -r configure:9962: checking for objdump configure:9978: found /usr/bin/objdump configure:9989: result: objdump configure:10021: checking how to recognize dependent libraries configure:10221: result: pass_all configure:10306: checking for dlltool configure:10336: result: no configure:10366: checking how to associate runtime and link libraries configure:10393: result: printf %s\n configure:10517: checking for archiver @FILE support configure:10550: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:10550: $? = 0 configure:10553: ar cr libconftest.a @conftest.lst >&5 configure:10556: $? = 0 configure:10561: ar cr libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:10564: $? = 1 configure:10576: result: @ configure:10634: checking for strip configure:10650: found /usr/bin/strip configure:10661: result: strip configure:10733: checking for ranlib configure:10749: found /usr/bin/ranlib configure:10760: result: ranlib configure:10862: checking command to parse /usr/bin/nm -B output from /home/software/openmpi/3.1.4/bin/mpicc object configure:11015: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:11018: $? = 0 configure:11022: /usr/bin/nm -B conftest.o | sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' > conftest.nm configure:11088: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c conftstm.o >&5 configure:11091: $? = 0 configure:11129: result: ok configure:11176: checking for sysroot configure:11206: result: no configure:11213: checking for a working dd configure:11251: result: /usr/bin/dd configure:11255: checking how to truncate binary pipes configure:11270: result: /usr/bin/dd bs=4096 count=1 configure:11406: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:11409: $? = 0 configure:11615: checking for mt configure:11645: result: no configure:11665: checking if : is a manifest tool configure:11671: : '-?' configure:11679: result: no configure:12372: checking how to run the C preprocessor configure:12403: /home/software/openmpi/3.1.4/bin/mpicc -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c configure:12403: $? = 0 configure:12417: /home/software/openmpi/3.1.4/bin/mpicc -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c conftest.c:33:28: fatal error: ac_nonexistent.h: No such file or directory #include ^ compilation terminated. configure:12417: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | /* end confdefs.h. */ | #include configure:12442: result: /home/software/openmpi/3.1.4/bin/mpicc -E configure:12462: /home/software/openmpi/3.1.4/bin/mpicc -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c configure:12462: $? = 0 configure:12476: /home/software/openmpi/3.1.4/bin/mpicc -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c conftest.c:33:28: fatal error: ac_nonexistent.h: No such file or directory #include ^ compilation terminated. configure:12476: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | /* end confdefs.h. */ | #include configure:12505: checking for ANSI C header files configure:12541: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12541: $? = 0 configure:12614: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12614: $? = 0 configure:12614: ./conftest configure:12614: $? = 0 configure:12625: result: yes configure:12638: checking for sys/types.h configure:12638: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12638: $? = 0 configure:12638: result: yes configure:12638: checking for sys/stat.h configure:12638: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12638: $? = 0 configure:12638: result: yes configure:12638: checking for stdlib.h configure:12638: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12638: $? = 0 configure:12638: result: yes configure:12638: checking for string.h configure:12638: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12638: $? = 0 configure:12638: result: yes configure:12638: checking for memory.h configure:12638: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12638: $? = 0 configure:12638: result: yes configure:12638: checking for strings.h configure:12638: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12638: $? = 0 configure:12638: result: yes configure:12638: checking for inttypes.h configure:12638: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12638: $? = 0 configure:12638: result: yes configure:12638: checking for stdint.h configure:12638: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12638: $? = 0 configure:12638: result: yes configure:12638: checking for unistd.h configure:12638: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12638: $? = 0 configure:12638: result: yes configure:12652: checking for dlfcn.h configure:12652: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:12652: $? = 0 configure:12652: result: yes configure:12918: checking for objdir configure:12933: result: .libs configure:13197: checking if /home/software/openmpi/3.1.4/bin/mpicc supports -fno-rtti -fno-exceptions configure:13215: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C [enabled by default] configure:13219: $? = 0 configure:13232: result: no configure:13596: checking for /home/software/openmpi/3.1.4/bin/mpicc option to produce PIC configure:13603: result: -fPIC -DPIC configure:13611: checking if /home/software/openmpi/3.1.4/bin/mpicc PIC flag -fPIC -DPIC works configure:13629: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL -fPIC -DPIC -DPIC conftest.c >&5 configure:13633: $? = 0 configure:13646: result: yes configure:13675: checking if /home/software/openmpi/3.1.4/bin/mpicc static flag -static works configure:13703: result: no configure:13718: checking if /home/software/openmpi/3.1.4/bin/mpicc supports -c -o file.o configure:13739: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL -o out/conftest2.o conftest.c >&5 configure:13743: $? = 0 configure:13765: result: yes configure:13773: checking if /home/software/openmpi/3.1.4/bin/mpicc supports -c -o file.o configure:13820: result: yes configure:13853: checking whether the /home/software/openmpi/3.1.4/bin/mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:15148: result: yes configure:15185: checking whether -lc should be explicitly linked in configure:15193: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:15196: $? = 0 configure:15211: /home/software/openmpi/3.1.4/bin/mpicc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /usr/bin/grep -lc \>/dev/null 2\>\&1 configure:15214: $? = 0 configure:15228: result: no configure:15388: checking dynamic linker characteristics configure:15985: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL -Wl,-rpath -Wl,/foo conftest.c >&5 configure:15985: $? = 0 configure:16234: result: GNU/Linux ld.so configure:16356: checking how to hardcode library paths into programs configure:16381: result: immediate configure:17009: checking whether stripping libraries is possible configure:17014: result: yes configure:17049: checking if libtool supports shared libraries configure:17051: result: yes configure:17054: checking whether to build shared libraries configure:17079: result: yes configure:17082: checking whether to build static libraries configure:17086: result: yes configure:17109: checking how to run the C++ preprocessor configure:17136: mpicxx -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.cpp configure:17136: $? = 0 configure:17150: mpicxx -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.cpp conftest.cpp:45:28: fatal error: ac_nonexistent.h: No such file or directory #include ^ compilation terminated. configure:17150: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:17175: result: mpicxx -E configure:17195: mpicxx -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.cpp configure:17195: $? = 0 configure:17209: mpicxx -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.cpp conftest.cpp:45:28: fatal error: ac_nonexistent.h: No such file or directory #include ^ compilation terminated. configure:17209: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:17371: checking for ld used by mpicxx configure:17438: result: /usr/bin/ld -m elf_x86_64 configure:17445: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld configure:17460: result: yes configure:17515: checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:18620: result: yes configure:18656: mpicxx -c -g -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.cpp >&5 configure:18659: $? = 0 configure:19140: checking for mpicxx option to produce PIC configure:19147: result: -fPIC -DPIC configure:19155: checking if mpicxx PIC flag -fPIC -DPIC works configure:19173: mpicxx -c -g -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL -fPIC -DPIC -DPIC conftest.cpp >&5 configure:19177: $? = 0 configure:19190: result: yes configure:19213: checking if mpicxx static flag -static works configure:19241: result: no configure:19253: checking if mpicxx supports -c -o file.o configure:19274: mpicxx -c -g -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL -o out/conftest2.o conftest.cpp >&5 configure:19278: $? = 0 configure:19300: result: yes configure:19305: checking if mpicxx supports -c -o file.o configure:19352: result: yes configure:19382: checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:19425: result: yes configure:19566: checking dynamic linker characteristics configure:20339: result: GNU/Linux ld.so configure:20404: checking how to hardcode library paths into programs configure:20429: result: immediate configure:20570: checking if libtool supports shared libraries configure:20572: result: yes configure:20575: checking whether to build shared libraries configure:20599: result: yes configure:20602: checking whether to build static libraries configure:20606: result: yes configure:20964: checking for mpif77 option to produce PIC configure:20971: result: -fPIC configure:20979: checking if mpif77 PIC flag -fPIC works configure:20997: mpif77 -c -g -O2 -fPIC conftest.f >&5 configure:21001: $? = 0 configure:21014: result: yes configure:21037: checking if mpif77 static flag -static works configure:21065: result: no configure:21077: checking if mpif77 supports -c -o file.o configure:21098: mpif77 -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:21102: $? = 0 configure:21124: result: yes configure:21129: checking if mpif77 supports -c -o file.o configure:21176: result: yes configure:21206: checking whether the mpif77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:22419: result: yes configure:22560: checking dynamic linker characteristics configure:23311: result: GNU/Linux ld.so configure:23376: checking how to hardcode library paths into programs configure:23401: result: immediate configure:23538: checking if libtool supports shared libraries configure:23540: result: yes configure:23543: checking whether to build shared libraries configure:23567: result: yes configure:23570: checking whether to build static libraries configure:23574: result: yes configure:23608: mpif90 -c -g -O2 conftest.f >&5 configure:23611: $? = 0 configure:24077: checking for mpif90 option to produce PIC configure:24084: result: -fPIC configure:24092: checking if mpif90 PIC flag -fPIC works configure:24110: mpif90 -c -g -O2 -fPIC conftest.f >&5 configure:24114: $? = 0 configure:24127: result: yes configure:24150: checking if mpif90 static flag -static works configure:24178: result: no configure:24190: checking if mpif90 supports -c -o file.o configure:24211: mpif90 -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:24215: $? = 0 configure:24237: result: yes configure:24242: checking if mpif90 supports -c -o file.o configure:24289: result: yes configure:24319: checking whether the mpif90 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:25532: result: yes configure:25673: checking dynamic linker characteristics configure:26424: result: GNU/Linux ld.so configure:26489: checking how to hardcode library paths into programs configure:26514: result: immediate configure:26570: checking for library containing fabs configure:26617: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 conftest.c:52:6: warning: conflicting types for built-in function 'fabs' [enabled by default] char fabs (); ^ /usr/bin/ld: /tmp/ccuNa83b.o: undefined reference to symbol 'fabs@@GLIBC_2.2.5' //usr/lib64/libm.so.6: error adding symbols: DSO missing from command line collect2: error: ld returned 1 exit status configure:26617: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char fabs (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return fabs (); | ; | return 0; | } configure:26617: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -lm >&5 conftest.c:52:6: warning: conflicting types for built-in function 'fabs' [enabled by default] char fabs (); ^ configure:26617: $? = 0 configure:26634: result: -lm configure:26645: checking for library containing adler32_combine configure:26692: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -lm >&5 /usr/bin/ld: /tmp/ccDEGZFg.o: undefined reference to symbol 'adler32_combine@@ZLIB_1.2.2' //usr/lib64/libz.so.1: error adding symbols: DSO missing from command line collect2: error: ld returned 1 exit status configure:26692: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char adler32_combine (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return adler32_combine (); | ; | return 0; | } configure:26692: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -lz -lm >&5 configure:26692: $? = 0 configure:26709: result: -lz configure:26734: checking for library containing lua_createtable configure:26781: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -lz -lm >&5 /tmp/ccRZiAKw.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `lua_createtable' collect2: error: ld returned 1 exit status configure:26781: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_ZLIB 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char lua_createtable (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return lua_createtable (); | ; | return 0; | } configure:26781: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua53 -lz -lm >&5 /usr/bin/ld: cannot find -llua53 collect2: error: ld returned 1 exit status configure:26781: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_ZLIB 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char lua_createtable (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return lua_createtable (); | ; | return 0; | } configure:26781: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua5.3 -lz -lm >&5 /usr/bin/ld: cannot find -llua5.3 collect2: error: ld returned 1 exit status configure:26781: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_ZLIB 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char lua_createtable (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return lua_createtable (); | ; | return 0; | } configure:26781: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua52 -lz -lm >&5 /usr/bin/ld: cannot find -llua52 collect2: error: ld returned 1 exit status configure:26781: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_ZLIB 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char lua_createtable (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return lua_createtable (); | ; | return 0; | } configure:26781: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua5.2 -lz -lm >&5 /usr/bin/ld: cannot find -llua5.2 collect2: error: ld returned 1 exit status configure:26781: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_ZLIB 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char lua_createtable (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return lua_createtable (); | ; | return 0; | } configure:26781: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua51 -lz -lm >&5 /usr/bin/ld: cannot find -llua51 collect2: error: ld returned 1 exit status configure:26781: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_ZLIB 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char lua_createtable (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return lua_createtable (); | ; | return 0; | } configure:26781: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua5.1 -lz -lm >&5 /usr/bin/ld: cannot find -llua5.1 collect2: error: ld returned 1 exit status configure:26781: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_ZLIB 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char lua_createtable (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return lua_createtable (); | ; | return 0; | } configure:26781: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua -lz -lm >&5 configure:26781: $? = 0 configure:26798: result: -llua configure:26845: Checking BLAS configure:28069: Not using BLAS configure:28102: Checking LAPACK configure:28414: Not using LAPACK configure:28432: checking for getopt configure:28465: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua -lz -lm >&5 configure:28465: $? = 0 configure:28466: result: successful configure:28493: checking for obstack configure:28528: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua -lz -lm >&5 configure:28528: $? = 0 configure:28529: result: successful configure:28557: checking for POSIX threads configure:28723: result: not used configure:28729: checking for OpenMP configure:28894: result: not used configure:28904: checking size of void * configure:28909: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua -lz -lm >&5 configure:28909: $? = 0 configure:28909: ./conftest configure:28909: $? = 0 configure:28923: result: 8 configure:28937: checking for aligned_alloc configure:28937: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua -lz -lm >&5 configure:28937: $? = 0 configure:28937: result: yes configure:28937: checking for posix_memalign configure:28937: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua -lz -lm >&5 configure:28937: $? = 0 configure:28937: result: yes configure:28947: checking for memory alignment option configure:28993: result: P4EST_SIZEOF_VOID_P configure:29027: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua -lz -lm >&5 conftest.c: In function 'main': conftest.c:74:10: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] int *a = (int *) aligned_alloc (SIZEOF_VOID_P, 3 * sizeof(*a)); ^ configure:29027: $? = 0 configure:29071: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua -lz -lm >&5 configure:29071: $? = 0 configure:29086: checking for sufficiently recent V4L2 configure:29159: /home/software/openmpi/3.1.4/bin/mpicc -o conftest -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c -llua -lz -lm >&5 conftest.c:77:2: error: #error "Linux v4l2 header not installed; disabling" #error "Linux v4l2 header not installed; disabling" ^ conftest.c:79:40: error: missing binary operator before token "(" #if LINUX_VERSION_CODE < KERNEL_VERSION(4,0,0) ^ conftest.c: In function 'main': conftest.c:104:26: error: storage size of 'pf' isn't known struct v4l2_pix_format pf; ^ conftest.c:105:18: error: 'V4L2_YCBCR_ENC_DEFAULT' undeclared (first use in this function) pf.ycbcr_enc = V4L2_YCBCR_ENC_DEFAULT; ^ conftest.c:105:18: note: each undeclared identifier is reported only once for each function it appears in conftest.c:106:21: error: 'V4L2_QUANTIZATION_DEFAULT' undeclared (first use in this function) pf.quantization = V4L2_QUANTIZATION_DEFAULT; ^ conftest.c:107:18: error: 'V4L2_XFER_FUNC_DEFAULT' undeclared (first use in this function) pf.xfer_func = V4L2_XFER_FUNC_DEFAULT; ^ conftest.c:109:14: error: 'O_NONBLOCK' undeclared (first use in this function) open ("/", O_NONBLOCK | O_RDWR); ^ conftest.c:109:27: error: 'O_RDWR' undeclared (first use in this function) open ("/", O_NONBLOCK | O_RDWR); ^ conftest.c:110:13: error: 'VIDIOC_QUERYCAP' undeclared (first use in this function) ioctl (0, VIDIOC_QUERYCAP, NULL); ^ conftest.c:111:13: error: 'VIDIOC_ENUMOUTPUT' undeclared (first use in this function) ioctl (0, VIDIOC_ENUMOUTPUT, NULL); ^ conftest.c:112:13: error: 'VIDIOC_S_OUTPUT' undeclared (first use in this function) ioctl (0, VIDIOC_S_OUTPUT, NULL); ^ conftest.c:113:13: error: 'VIDIOC_S_FMT' undeclared (first use in this function) ioctl (0, VIDIOC_S_FMT, NULL); ^ configure:29159: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "p4est" | #define PACKAGE_TARNAME "p4est" | #define PACKAGE_VERSION "2.3.2" | #define PACKAGE_STRING "p4est 2.3.2" | #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" | #define PACKAGE_URL "" | #define PACKAGE "p4est" | #define VERSION "2.3.2" | #define VERSION_MAJOR 2 | #define VERSION_MINOR 3 | #define VERSION_POINT 2 | #define VTK_COMPRESSION 1 | #define ENABLE_VTK_COMPRESSION 1 | #define BUILD_2D 1 | #define ENABLE_BUILD_2D 1 | #define BUILD_3D 1 | #define ENABLE_BUILD_3D 1 | #define BUILD_P6EST 1 | #define ENABLE_BUILD_P6EST 1 | #define MPI 1 | #define ENABLE_MPI 1 | #define MPIIO 1 | #define ENABLE_MPIIO 1 | #define ENABLE_MPITHREAD 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ENABLE_MPIWINSHARED 1 | #define ENABLE_MPICOMMSHARED 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_ZLIB 1 | #define HAVE_LUA 1 | #define SIZEOF_VOID_P 8 | #define HAVE_ALIGNED_ALLOC 1 | #define HAVE_POSIX_MEMALIGN 1 | #define MEMALIGN 1 | #define ENABLE_MEMALIGN 1 | #define MEMALIGN_BYTES (P4EST_SIZEOF_VOID_P) | /* end confdefs.h. */ | | #include | #ifdef HAVE_FCNTL_H | #include | #endif | #ifdef HAVE_UNISTD_H | #include | #endif | #ifdef HAVE_SYS_IOCTL_H | #include | #endif | #ifdef HAVE_SYS_SELECT_H | #include | #endif | #ifdef HAVE_SYS_STAT_H | #include | #endif | #ifdef HAVE_SYS_TYPES_H | #include | #endif | #if defined HAVE_LINUX_VIDEODEV2_H && defined HAVE_LINUX_VERSION_H | #include | #include | #else | #error "Linux v4l2 header not installed; disabling" | #endif | #if LINUX_VERSION_CODE < KERNEL_VERSION(4,0,0) | #error "Disabling v4l2 code for linux version < 4" | #endif | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | /* test whether some more recent members exist */ | struct v4l2_pix_format pf; | pf.ycbcr_enc = V4L2_YCBCR_ENC_DEFAULT; | pf.quantization = V4L2_QUANTIZATION_DEFAULT; | pf.xfer_func = V4L2_XFER_FUNC_DEFAULT; | | open ("/", O_NONBLOCK | O_RDWR); | ioctl (0, VIDIOC_QUERYCAP, NULL); | ioctl (0, VIDIOC_ENUMOUTPUT, NULL); | ioctl (0, VIDIOC_S_OUTPUT, NULL); | ioctl (0, VIDIOC_S_FMT, NULL); | select (0, NULL, NULL, NULL, NULL); | write (0, NULL, 0); | | ; | return 0; | } configure:29172: result: no configure:29189: checking for metis configure:29280: result: not used configure:29289: checking for petscarch configure:29322: result: no configure:29327: checking for PETSc configure:29500: result: not used configure:29516: checking arpa/inet.h usability configure:29516: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:29516: $? = 0 configure:29516: result: yes configure:29516: checking arpa/inet.h presence configure:29516: /home/software/openmpi/3.1.4/bin/mpicc -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c configure:29516: $? = 0 configure:29516: result: yes configure:29516: checking for arpa/inet.h configure:29516: result: yes configure:29516: checking netinet/in.h usability configure:29516: /home/software/openmpi/3.1.4/bin/mpicc -c -O2 -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c >&5 configure:29516: $? = 0 configure:29516: result: yes configure:29516: checking netinet/in.h presence configure:29516: /home/software/openmpi/3.1.4/bin/mpicc -E -DSC_LOG_PRIORITY=SC_LP_ESSENTIAL conftest.c configure:29516: $? = 0 configure:29516: result: yes configure:29516: checking for netinet/in.h configure:29516: result: yes configure:29516: checking for unistd.h configure:29516: result: yes configure:29612: Building with source of package sc configure:29821: checking that generated files are newer than configure configure:29827: result: done configure:29962: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by p4est config.status 2.3.2, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on master config.status:1387: creating Makefile config.status:1387: creating Doxyfile config.status:1387: creating config/Makefile.p4est.pre config.status:1387: creating config/p4est_autotools.pc config.status:1387: creating config/p4est_autotools_config.h config.status:1601: executing config/p4est_config.h commands config.status:1639: creating config/p4est_config.h - prefix P4EST for config/p4est_autotools_config.h defines config.status:1601: executing depfiles commands config.status:1767: cd . && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles config.status:1772: $? = 0 config.status:1601: executing libtool commands configure:33010: === configuring in sc (/home/wangyj/software/INSTALL/candi/tmp/build/p4est-2.3.2/FAST/sc) configure:33073: running /bin/sh /home/wangyj/software/INSTALL/candi/tmp/unpack/p4est-2.3.2/sc/configure --disable-option-checking '--prefix=/home/wangyj/software/INSTALL/candi/p4est-2.3.2/FAST' '--enable-mpi' '--enable-shared' '--disable-vtk-binary' '--without-blas' 'CFLAGS=-O2' 'CPPFLAGS=-DSC_LOG_PRIORITY=SC_LP_ESSENTIAL' 'F77=mpif77' 'CC=/home/software/openmpi/3.1.4/bin/mpicc' 'FC=mpif90' 'CXX=mpicxx' --cache-file=/dev/null --srcdir=/home/wangyj/software/INSTALL/candi/tmp/unpack/p4est-2.3.2/sc ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=/home/software/openmpi/3.1.4/bin/mpicc ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value=-O2 ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value=-DSC_LOG_PRIORITY=SC_LP_ESSENTIAL ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set=set ac_cv_env_CXX_value=mpicxx ac_cv_env_F77_set=set ac_cv_env_F77_value=mpif77 ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=mpif90 ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=yes ac_cv_f77_dummy_main=none ac_cv_f77_libs=' -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread' ac_cv_f77_mangling='lower case, underscore, no extra underscore' ac_cv_fc_compiler_gnu=yes ac_cv_fc_dummy_main=none ac_cv_fc_libs=' -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread' ac_cv_fc_mangling='lower case, underscore, no extra underscore' ac_cv_fortran_dummy_main=none ac_cv_func_aligned_alloc=yes ac_cv_func_posix_memalign=yes ac_cv_header_arpa_inet_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_netinet_in_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_LINT=no ac_cv_path_SED=/usr/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/usr/bin/dd ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_CPP='/home/software/openmpi/3.1.4/bin/mpicc -E' ac_cv_prog_CXXCPP='mpicxx -E' ac_cv_prog_P4EST_MPIRUN=mpiexec ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=/home/software/openmpi/3.1.4/bin/mpicc ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc__home_software_openmpi_3_1_4_bin_mpicc_c_o=yes ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_c_o=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_c_o=yes ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_fc_c_o=yes ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ac_cv_prog_make_make_set=yes ac_cv_search_adler32_combine=-lz ac_cv_search_fabs=-lm ac_cv_search_lua_createtable=-llua ac_cv_sizeof_void_p=8 am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_ar_interface=ar am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64' lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC' lt_cv_prog_compiler_pic_F77=-fPIC lt_cv_prog_compiler_pic_FC=-fPIC lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_pic_works_F77=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=no lt_cv_prog_compiler_static_works_F77=no lt_cv_prog_compiler_static_works_FC=no lt_cv_prog_gnu_ld=yes lt_cv_prog_gnu_ldcxx=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1' sc_cv_c_check_flag__V=no sc_cv_c_check_flag__dumpversion=no ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /home/wangyj/software/INSTALL/candi/tmp/unpack/p4est-2.3.2/build-aux/missing aclocal-1.16' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /home/wangyj/software/INSTALL/candi/tmp/unpack/p4est-2.3.2/build-aux/missing autoconf' AUTOHEADER='${SHELL} /home/wangyj/software/INSTALL/candi/tmp/unpack/p4est-2.3.2/build-aux/missing autoheader' AUTOMAKE='${SHELL} /home/wangyj/software/INSTALL/candi/tmp/unpack/p4est-2.3.2/build-aux/missing automake-1.16' AWK='gawk' CC='/home/software/openmpi/3.1.4/bin/mpicc' CCDEPMODE='depmode=gcc3' CFLAGS='-O2' CPP='/home/software/openmpi/3.1.4/bin/mpicc -E' CPPFLAGS='-DSC_LOG_PRIORITY=SC_LP_ESSENTIAL' CXX='mpicxx' CXXCPP='mpicxx -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS='-g -O2' CYGPATH_W='echo' C_VERSION='' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DLLTOOL='false' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' EXEEXT='' F77='mpif77' FC='mpif90' FCFLAGS='-g -O2' FCLIBS=' -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread' FFLAGS='-g -O2' FGREP='/usr/bin/grep -F' FLIBS=' -L/home/software/openmpi/3.1.4/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread' GREP='/usr/bin/grep' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS='' LIBOBJS='' LIBS=' -llua -lz -lm ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LINT='no' LINT_FALSE='' LINT_FLAGS='' LINT_TRUE='#' LIPO='' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAKEINFO='${SHELL} /home/wangyj/software/INSTALL/candi/tmp/unpack/p4est-2.3.2/build-aux/missing makeinfo' MANIFEST_TOOL=':' MKDIR_P='/usr/bin/mkdir -p' MPI_INCLUDES='-I/home/software/openmpi/3.1.4/include' MPI_INCLUDE_PATH='/home/software/openmpi/3.1.4/include' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' P4EST_DISTCLEAN=' P4EST_SC_SOURCE.log' P4EST_DIST_DENY_FALSE='' P4EST_DIST_DENY_TRUE='#' P4EST_ENABLE_BUILD_2D_FALSE='#' P4EST_ENABLE_BUILD_2D_TRUE='' P4EST_ENABLE_BUILD_3D_FALSE='#' P4EST_ENABLE_BUILD_3D_TRUE='' P4EST_ENABLE_BUILD_P6EST_FALSE='#' P4EST_ENABLE_BUILD_P6EST_TRUE='' P4EST_ENABLE_DEBUG_FALSE='' P4EST_ENABLE_DEBUG_TRUE='#' P4EST_ENABLE_MEMALIGN_FALSE='#' P4EST_ENABLE_MEMALIGN_TRUE='' P4EST_ENABLE_MPIIO_FALSE='#' P4EST_ENABLE_MPIIO_TRUE='' P4EST_ENABLE_MPITHREAD_FALSE='#' P4EST_ENABLE_MPITHREAD_TRUE='' P4EST_ENABLE_MPI_FALSE='#' P4EST_ENABLE_MPI_TRUE='' P4EST_ENABLE_OPENMP_FALSE='' P4EST_ENABLE_OPENMP_TRUE='#' P4EST_ENABLE_PTHREAD_FALSE='' P4EST_ENABLE_PTHREAD_TRUE='#' P4EST_ENABLE_V4L2_FALSE='' P4EST_ENABLE_V4L2_TRUE='#' P4EST_ENABLE_VTK_BINARY_FALSE='' P4EST_ENABLE_VTK_BINARY_TRUE='#' P4EST_ENABLE_VTK_COMPRESSION_FALSE='#' P4EST_ENABLE_VTK_COMPRESSION_TRUE='' P4EST_ENABLE_VTK_DOUBLES_FALSE='' P4EST_ENABLE_VTK_DOUBLES_TRUE='#' P4EST_F77_COMPILER='' P4EST_FC_COMPILER='' P4EST_HAVE_LUA_FALSE='#' P4EST_HAVE_LUA_TRUE='' P4EST_HAVE_ZLIB_FALSE='#' P4EST_HAVE_ZLIB_TRUE='' P4EST_MPIRUN='mpiexec' P4EST_MPIRUN_FALSE='#' P4EST_MPIRUN_TRUE='' P4EST_MPI_TEST_FLAGS='-n 2' P4EST_PETSC_INCLUDE_DIRS='' P4EST_PETSC_LINK_LIBS='' P4EST_PROVIDE_GETOPT_FALSE='' P4EST_PROVIDE_GETOPT_TRUE='#' P4EST_PROVIDE_OBSTACK_FALSE='' P4EST_PROVIDE_OBSTACK_TRUE='#' P4EST_SC_AMFLAGS='-I $(top_srcdir)/sc/config' P4EST_SC_CPPFLAGS='-Isc/config -Isc/src -I$(top_srcdir)/sc/src' P4EST_SC_LDADD='sc/src/libsc.la' P4EST_SC_MK_INCLUDE='include ${p4est_sysconfdir}/Makefile.sc.mk' P4EST_SC_MK_USE_FALSE='' P4EST_SC_MK_USE_TRUE='#' P4EST_SC_SUBDIR='sc' P4EST_WITH_BLAS_FALSE='' P4EST_WITH_BLAS_TRUE='#' P4EST_WITH_LAPACK_FALSE='' P4EST_WITH_LAPACK_TRUE='#' P4EST_WITH_METIS_FALSE='' P4EST_WITH_METIS_TRUE='#' P4EST_WITH_PETSC_FALSE='' P4EST_WITH_PETSC_TRUE='#' P4EST_WITH_SC_FALSE='' P4EST_WITH_SC_TRUE='#' PACKAGE='p4est' PACKAGE_BUGREPORT='p4est@ins.uni-bonn.de' PACKAGE_NAME='p4est' PACKAGE_PREFIX='P4EST' PACKAGE_STRING='p4est 2.3.2' PACKAGE_TARNAME='p4est' PACKAGE_URL='' PACKAGE_VERSION='2.3.2' PATH_SEPARATOR=':' PETSCARCH_PROG='' RANLIB='ranlib' SED='/usr/bin/sed' SET_MAKE='' SHELL='/bin/sh' STRIP='strip' VERSION='2.3.2' ac_ct_AR='ar' ac_ct_CC='/home/software/openmpi/3.1.4/bin/mpicc' ac_ct_CXX='' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc=' -I$(srcdir)' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /home/wangyj/software/INSTALL/candi/tmp/unpack/p4est-2.3.2/build-aux/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' pkgconfigdir='${libdir}/pkgconfig' prefix='/home/wangyj/software/INSTALL/candi/p4est-2.3.2/FAST' program_transform_name='s,x,x,' psdir='${docdir}' runstatedir='${localstatedir}/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs=' sc' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "p4est" #define PACKAGE_TARNAME "p4est" #define PACKAGE_VERSION "2.3.2" #define PACKAGE_STRING "p4est 2.3.2" #define PACKAGE_BUGREPORT "p4est@ins.uni-bonn.de" #define PACKAGE_URL "" #define PACKAGE "p4est" #define VERSION "2.3.2" #define VERSION_MAJOR 2 #define VERSION_MINOR 3 #define VERSION_POINT 2 #define VTK_COMPRESSION 1 #define ENABLE_VTK_COMPRESSION 1 #define BUILD_2D 1 #define ENABLE_BUILD_2D 1 #define BUILD_3D 1 #define ENABLE_BUILD_3D 1 #define BUILD_P6EST 1 #define ENABLE_BUILD_P6EST 1 #define MPI 1 #define ENABLE_MPI 1 #define MPIIO 1 #define ENABLE_MPIIO 1 #define ENABLE_MPITHREAD 1 #define F77_FUNC(name,NAME) name ## _ #define F77_FUNC_(name,NAME) name ## _ #define FC_FUNC(name,NAME) name ## _ #define FC_FUNC_(name,NAME) name ## _ #define ENABLE_MPIWINSHARED 1 #define ENABLE_MPICOMMSHARED 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_ZLIB 1 #define HAVE_LUA 1 #define SIZEOF_VOID_P 8 #define HAVE_ALIGNED_ALLOC 1 #define HAVE_POSIX_MEMALIGN 1 #define MEMALIGN 1 #define ENABLE_MEMALIGN 1 #define MEMALIGN_BYTES (P4EST_SIZEOF_VOID_P) #define HAVE_ARPA_INET_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_UNISTD_H 1 #define CPP "/home/software/openmpi/3.1.4/bin/mpicc -E" #define CPPFLAGS "-DSC_LOG_PRIORITY=SC_LP_ESSENTIAL" #define CC "/home/software/openmpi/3.1.4/bin/mpicc" #define CFLAGS "-O2" #define LDFLAGS "" #define LIBS " -llua -lz -lm " configure: exit 0